Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS18505
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-0.7
carbon source	L-Malic (C)	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
carbon source	D-Mannose (C)	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
supernatant control	Vogels_fungal_media; pH 5.5	-0.4
vitamin	No vitamins t1	-0.4
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 3 days	-0.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.4
agar plate interaction control	Taped volatile agar plate with no fungus	-0.3
stress	A22 0.04 mg/ml	+0.3
carbon source	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL	+0.3
carbon source	a-Ketoglutaric (C)	+0.4
carbon source	D-Glucose-6-Phosphate (C)	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
carbon source	L-Fucose (C)	+0.4
carbon source	pyruvate (C)	+0.4
carbon source	m-Inositol (C)	+0.4
carbon source	L-Lactate (C)	+0.4
carbon source	L-Fucose (C)	+0.4
carbon source	m-Inositol (C)	+0.4
carbon source	L-Arabinose (C)	+0.4
carbon source	L-Fucose (C)	+0.5
carbon source	Glycerol (C)	+0.5
carbon source	D,L-Lactate (C)	+0.5
carbon source	D-Glucose-6-Phosphate (C)	+0.5
carbon source	D-Galacturonic Acid (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.6
stress	Lomefloxacin 0.012 mM	+0.7
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