Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS18125
carbon source D-Galactose (C) -0.9
carbon source D-Glucose (C) -0.9
carbon source Xylitol (C) -0.7
plant Control soil assay; outgrowth in LB -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6
carbon source D-Xylose (C) -0.6
carbon source D-Glucose (C) -0.6
stress Cobalt chloride 0.2 mM -0.5
carbon source Glycerol (C) -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
carbon source D-Glucose-6-Phosphate (C) -0.5
carbon source L-Rhamnose (C) -0.5
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5
vitamin With vitamins t1 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5
micoeukaryotes C.elegans, mixed culture-1 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.5
supernatant control Vogels_fungal_media; pH 5.5 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.5
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HSERO_RS18125