Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS17505
r2a control R2A control -0.4
carbon source L-Arabinose (C) -0.4
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3
carbon source Xylitol (C) -0.3
carbon source succinate (C) -0.3
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.3
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.3
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.2
agar plate interaction control Taped volatile agar plate with no fungus -0.2
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.2
carbon source D-Xylose (C) +0.2
nutrient casaminos +0.3
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.3
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.3
carbon source D-Glucose (C) +0.3
stress Nickel (II) chloride 0.6 mM +0.3
stress Cobalt chloride 0.2 mM +0.3
carbon source D-Mannose (C) +0.3
carbon source L-Fucose (C) +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5
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HSERO_RS17505