Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Group Condition HSERO_RS17240
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.5
carbon source D-Mannose (C) -0.4
stress Lomefloxacin 0.012 mM -0.4
stress Thallium(I) acetate 0.001 mg/ml -0.4
micoeukaryotes C.elegans, mixed culture-2 -0.4
carbon source D-Glucose (C) -0.3
carbon source L-Rhamnose (C) -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3
carbon source L-Rhamnose (C) +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
carbon source D-Glucose-6-Phosphate (C) +0.4
carbon source L-Glutamine (C) +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4
carbon source succinate (C) +0.4
carbon source L-Fucose (C) +0.4
nutrient Min media with glucose +0.4
carbon source D-Ribose (C) +0.4
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
carbon source D-Galactose (C) +0.5
carbon source D-Gluconic Acid (C) +0.5
carbon source D-Lactate (C) +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8
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HSERO_RS17240