Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS16790
carbon source	D-Sorbitol (C)	-1.2
micoeukaryotes	C.elegans, mixed culture-2	-1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.0
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
micoeukaryotes	Acanthamoeba sp., muxed culture-1	-0.7
carbon source	D-Galactose (C)	-0.7
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.6
plant	Control soil assay; outgrowth in LB	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.6
carbon source	L-Arabinose (C)	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.6
carbon source	D-Galactose (C)	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.6
carbon source	Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.8
stress	nitrate 200 mM	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.0
carbon source	L-Fucose (C)	+1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.7
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