Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS16300
carbon source L-Arabinose (C) -2.2
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -2.0
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -2.0
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -2.0
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -1.8
agar plate interaction control Taped volatile agar plate with no fungus -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7
carbon source D-Gluconic Acid (C) -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6
carbon source D-Glucose-6-Phosphate (C) -0.6
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -0.6
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5
plant Control soil assay; outgrowth in LB -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
carbon source D,L-Lactate (C) -0.5
plant Control soil assay; outgrowth in LB -0.4
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.4
carbon source D-Ribose (C) -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.4
carbon source D-Galacturonic Acid (C) +0.4
carbon source L-Malic (C) +0.4
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5
stress A22 0.04 mg/ml +0.5
carbon source L-Asparagine (C) +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.7
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HSERO_RS16300