Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 244 experiments or choose conditions

Group Condition HSERO_RS15795
carbon source D-Galacturonic Acid (C) -4.1
carbon source D-Galacturonic Acid (C) -3.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.7
stress Cobalt chloride 0.2 mM -0.7
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
carbon source D-Ribose (C) +0.5
carbon source L-Fucose (C) +0.5
carbon source D-Sorbitol (C) +0.5
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5
carbon source D-Mannitol (C) +0.5
plant Control soil assay; outgrowth in LB +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6
carbon source D-Glucose (C) +0.6
carbon source D-Glucose-6-Phosphate (C) +0.6
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.6
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7
carbon source D,L-Malic Acid (C) +0.7
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7
carbon source L-Rhamnose (C) +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9
remove
HSERO_RS15795