Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS14960
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -2.2
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -2.1
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.1
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.8
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -1.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5
carbon source D-Mannose (C) -1.5
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.4
carbon source succinate (C) -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -1.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.2
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -1.2
carbon source L-Rhamnose (C) -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1
micoeukaryotes C.elegans, mixed culture-2 +1.2
control NoPredeControl +1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.4
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HSERO_RS14960