Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS14040
carbon source	D-Glucose (C)	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.6
micoeukaryotes	C.elegans, mixed culture-2	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5
carbon source	L-Arabinose (C)	-0.5
carbon source	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.5
carbon source	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM	-0.5
carbon source	Carbon source 2-Deoxy-D-Ribose 5 mM	-0.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.4
r2a control	R2A control	-0.4
carbon source	Carbon source Phenylacetic 5 mM	-0.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.4
carbon source	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3
carbon source	L-Lactate (C)	+0.3
nutrient	Min media with glucose	+0.3
carbon source	D-Ribose (C)	+0.3
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	+0.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
carbon source	L-Fucose (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.5
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