Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS13010
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.5
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.3
carbon source D-Galactose (C) -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.3
stress Lomefloxacin 0.012 mM -0.3
carbon source Carbon source Phenylacetic 5 mM -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2
supernatant control Vogels_fungal_media 0.1X +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
carbon source pyruvate (C) +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
supernatant control Vogels_fungal_media 0.1X +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3
carbon source Xylitol (C) +0.3
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3
agar plate interaction control Taped volatile agar plate with no fungus +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
carbon source L-Lactate (C) +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6
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HSERO_RS13010