Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS11505
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.8
carbon source L-Arabinose (C) -0.8
stress Cobalt chloride 0.2 mM -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8
stress Nickel (II) chloride 0.6 mM -0.7
stress Cisplatin 0.003 mg/ml -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5
carbon source L-mannose (C) -0.5
stress Sisomicin 0.125 mg/ml -0.5
carbon source D-Xylose (C) -0.5
carbon source D-Glucose (C) -0.5
carbon source m-Inositol (C) -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.4
nitrogen source L-Glutamic (N); high aeration -0.4
nutrient L-Histidine -0.4
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4
agar plate interaction control Taped volatile agar plate with no fungus +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.5
agar plate interaction control Taped volatile agar plate with no fungus +0.5
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.5
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5
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HSERO_RS11505