Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS11120
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-0.4
stress	Cisplatin 0.003 mg/ml	-0.3
supernatant control	Vogels_fungal_media; pH 5.5	-0.3
stress	Nickel (II) chloride 0.6 mM	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3
carbon source	a-Ketoglutaric (C)	+0.3
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.3
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.3
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 8 days	+0.3
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.3
carbon source	a-Ketoglutaric (C)	+0.3
carbon source	D-Gluconic Acid (C)	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3
carbon source	pyruvate (C)	+0.3
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3
carbon source	L-Lactate (C)	+0.4
carbon source	L-Fucose (C)	+0.4
carbon source	D-Galactose (C)	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
carbon source	L-Arabinose (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.6
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