Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS10560
carbon source D,L-Lactate (C) -4.7
carbon source D,L-Lactate (C) -4.3
carbon source L-Fucose (C) -0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5
stress Lomefloxacin 0.012 mM -0.5
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4
stress Sisomicin 0.125 mg/ml -0.4
carbon source pyruvate (C) -0.4
stress nitrate 200 mM -0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.3
carbon source L-Arabinose (C) -0.3
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
carbon source L-Lactate (C) +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.3
stress A22 0.04 mg/ml +0.3
carbon source D-Sorbitol (C) +0.3
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
agar plate interaction control Taped volatile agar plate with no fungus +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5
control NoPredeControl +0.5
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7
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HSERO_RS10560