Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS08100
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-1.7
carbon source	Carbon source Phenylacetic 5 mM	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-1.6
carbon source	Carbon source Phenylacetic 5 mM	-1.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-1.1
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	-0.9
stress	Lomefloxacin 0.012 mM	-0.8
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.8
supernatant control	Vogels_fungal_media; pH 5.5	-0.8
carbon source	D-Gluconic Acid (C)	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	-0.8
supernatant control	Vogels_fungal_media; pH 5.5	-0.8
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	-0.7
carbon source	L-Lactate (C)	-0.7
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.7
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.7
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.7
carbon source	L-Rhamnose (C)	-0.7
carbon source	L-Fucose (C)	-0.6
carbon source	D-Lactate (C)	-0.6
nitrogen source	nitrate (N); low aeration	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
carbon source	D-Glucose (C)	-0.5
stress	Sisomicin 0.125 mg/ml	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
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