Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS08000
micoeukaryotes	Acanthamoeba sp., muxed culture-1	-3.5
stress	Nickel (II) chloride 0.6 mM	-3.0
micoeukaryotes	C.elegans, mixed culture-2	-2.3
micoeukaryotes	C.elegans, mixed culture-1	-1.7
micoeukaryotes	Dictyostellum sp.mixed culture-1	-1.6
carbon source	L-Arabinose (C)	-1.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-1.3
supernatant control	Vogels_fungal_media 0.1X	-1.3
stress	Cobalt chloride 0.2 mM	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.2
carbon source	D-Galactose (C)	-1.1
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-1.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-1.0
supernatant control	Vogels_fungal_media 0.1X	-1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9
carbon source	D,L-Lactate (C)	-0.9
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.9
micoeukaryotes	Dictyostellum sp.mixed culture-2	-0.9
r2a control	R2A control	-0.9
carbon source	D,L-Lactate (C)	-0.8
carbon source	D,L-Lactate (C)	-0.8
carbon source	L-Fucose (C)	-0.8
nitrogen source	nitrate (N); low aeration	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7
carbon source	m-Inositol (C)	-0.7
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.7
stress	Sisomicin 0.125 mg/ml	+0.8
control	NoPredeControl	+0.8
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