Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS07610
carbon source	L-Lactate (C)	-0.7
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.7
carbon source	L-Malic (C)	-0.5
carbon source	Xylitol (C)	-0.5
carbon source	D-Ribose (C)	-0.5
plant	Control soil assay; outgrowth in LB	-0.4
carbon source	D-Ribose (C)	-0.4
carbon source	L-Glutamine (C)	-0.4
carbon source	D-Galactose (C)	-0.4
carbon source	D-Gluconic Acid (C)	-0.4
carbon source	L-Arabinose (C)	-0.4
carbon source	pyruvate (C)	-0.4
carbon source	L-Rhamnose (C)	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3
carbon source	D-Galactose (C)	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
nitrogen source	nitrate (N); high aeration	+0.4
vitamin	No vitamins t1	+0.4
nitrogen source	Ammonium chloride (N); high aeration	+0.4
carbon source	D-Mannitol (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.5
control	NoPredeControl	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.6
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