Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Group Condition HSERO_RS07490
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5
carbon source Xylitol (C) -0.5
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.4
carbon source D-Galactose (C) -0.4
carbon source D-Xylose (C) +0.4
carbon source L-Arabinose (C) +0.4
supernatant control Vogels_fungal_media; pH 5.5 +0.4
carbon source L-mannose (C) +0.4
stress nitrate 200 mM +0.4
stress Chloride stress +0.4
stress Cobalt chloride 0.2 mM +0.5
plant Control soil assay; outgrowth in LB +0.5
carbon source L-Proline (C) +0.5
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.5
nitrogen source nitrate (N); low aeration +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5
carbon source L-Fucose (C) +0.5
carbon source D-Galactose (C) +0.6
plant Control soil assay; outgrowth in LB +0.6
nitrogen source L-Glutamic (N); low aeration +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2
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HSERO_RS07490