Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS06765
carbon source	Carbon source Phenylacetic 5 mM	-0.7
micoeukaryotes	C.elegans, mixed culture-2	-0.6
carbon source	Carbon source Phenylacetic 5 mM	-0.5
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.5
vitamin	With vitamins t2	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
stress	Dimethyl Sulfoxide 5 vol%	-0.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.4
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	-0.4
stress	sodium fluoride 100 mM	-0.4
carbon source	L-Rhamnose (C)	-0.4
stress	nitrate 200 mM	-0.4
carbon source	D-Glucose-6-Phosphate (C)	+0.4
r2a control	R2A control	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
carbon source	succinate (C)	+0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.4
carbon source	Xylitol (C)	+0.4
carbon source	D-Galacturonic Acid (C)	+0.4
carbon source	D-Lactate (C)	+0.4
carbon source	D-Lactate (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.5
carbon source	L-Asparagine (C)	+0.5
carbon source	m-Inositol (C)	+0.5
carbon source	D-Sorbitol (C)	+0.5
carbon source	L-Fucose (C)	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.4
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