Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Group Condition HSERO_RS06075
carbon source D-Lactate (C) -1.0
carbon source D-Galactose (C) -0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7
stress Lomefloxacin 0.012 mM -0.7
carbon source L-Arabinose (C) -0.6
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6
carbon source D-Ribose (C) -0.6
stress Sisomicin 0.125 mg/ml -0.5
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5
carbon source L-Glutamine (C) -0.5
carbon source L-Rhamnose (C) -0.5
nitrogen source L-Glutamic (N); low aeration -0.5
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.5
carbon source pyruvate (C) -0.5
carbon source D-Ribose (C) -0.5
carbon source Xylitol (C) -0.5
carbon source succinate (C) -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4
vitamin With vitamins t2 +0.5
carbon source L-Proline (C) +0.6
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7
vitamin No vitamins t2 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0
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HSERO_RS06075