Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS05800
carbon source L-Arabinose (C) -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5
carbon source D-Glucose-6-Phosphate (C) -0.4
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4
control NoPredeControl -0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4
plant Control soil assay; outgrowth in LB -0.3
carbon source Carbon source D-Glucose 20 mM -0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.3
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
carbon source D-Glucose (C) +0.3
carbon source L-Malic (C) +0.3
control NoPredeControl +0.3
carbon source D-Ribose (C) +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
nutrient casaminos +0.3
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3
carbon source a-Ketoglutaric (C) +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
nitrogen source L-Proline (N) +0.4
carbon source D-Xylose (C) +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
stress Thallium(I) acetate 0.001 mg/ml +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
stress Cisplatin 0.003 mg/ml +0.4
stress sodium fluoride 100 mM +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6
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HSERO_RS05800