Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 244 experiments or choose conditions

Group Condition HSERO_RS05655
plant Control soil assay; outgrowth in LB -0.8
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.8
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7
carbon source m-Inositol (C) -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6
stress Chloride stress -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.5
plant Control soil assay; outgrowth in LB -0.5
nitrogen source L-Glutamic (N); high aeration -0.4
carbon source D-Galacturonic Acid (C) -0.4
carbon source L-Lactate (C) -0.4
carbon source D-Gluconic Acid (C) -0.4
nitrogen source nitrate (N); high aeration -0.4
carbon source D,L-Lactate (C) -0.4
carbon source Xylitol (C) -0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4
nitrogen source Ammonium chloride (N); low aeration -0.4
control NoPredeControl -0.4
stress Cobalt chloride 0.2 mM -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.4
carbon source L-Lactate (C) -0.4
carbon source L-mannose (C) -0.3
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
remove
HSERO_RS05655