Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 244 experiments or choose conditions

Group Condition HSERO_RS05635
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.5
control NoPredeControl -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.2
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.2
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.2
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.2
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM +0.2
carbon source D-Xylose (C) +0.2
stress A22 0.04 mg/ml +0.2
carbon source L-Arabinose (C) +0.2
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.2
carbon source D-Mannitol (C) +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2
carbon source L-Glutamine (C) +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
carbon source Xylitol (C) +0.3
supernatant control Vogels_fungal_media; pH 5.5 +0.3
agar plate interaction control Taped volatile agar plate with no fungus +0.3
carbon source D-Ribose (C) +0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4
stress Sisomicin 0.125 mg/ml +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.4
agar plate interaction control Taped volatile agar plate with no fungus +0.5
remove
HSERO_RS05635