Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS05250
carbon source L-Fucose (C) -2.2
carbon source L-Fucose (C) -2.1
carbon source D-Ribose (C) -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6
plant Control soil assay; outgrowth in LB -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
carbon source L-Arabinose (C) -0.4
control NoPredeControl -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
carbon source L-mannose (C) -0.4
stress Sisomicin 0.125 mg/ml -0.4
carbon source D-Galactose (C) -0.3
carbon source L-Fucose (C) -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3
stress Lomefloxacin 0.012 mM -0.3
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3
carbon source D-Mannitol (C) -0.3
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.3
carbon source a-Ketoglutaric (C) +0.3
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4
carbon source D-Sorbitol (C) +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
stress Cobalt chloride 0.2 mM +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5
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HSERO_RS05250