Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS05205
carbon source	L-Arabinose (C)	-3.1
carbon source	L-Arabinose (C)	-2.6
carbon source	D-Mannose (C)	-1.4
carbon source	D-Mannose (C)	-1.0
carbon source	D-Glucose (C)	-0.7
stress	Cobalt chloride 0.2 mM	-0.6
carbon source	D-Galacturonic Acid (C)	-0.6
carbon source	Xylitol (C)	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5
carbon source	L-Glutamine (C)	-0.5
carbon source	D-Lactate (C)	-0.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.5
carbon source	L-Proline (C)	-0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5
carbon source	D-Xylose (C)	-0.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4
carbon source	L-Malic (C)	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
r2a control	R2A control	+0.4
nitrogen source	Ammonium chloride (N); high aeration	+0.4
carbon source	D-Glucose (C)	+0.4
agar plate interaction control	Taped volatile agar plate with no fungus	+0.4
carbon source	L-Fucose (C)	+0.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4
stress	Sisomicin 0.125 mg/ml	+0.5
carbon source	L-Fucose (C)	+0.5
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.1
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