Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS04660
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8
stress Sisomicin 0.125 mg/ml -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
r2a control R2A control -0.4
nitrogen source nitrate (N); low aeration -0.4
control NoPredeControl -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4
carbon source L-Fucose (C) -0.4
carbon source Glycerol (C) -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4
supernatant control Vogels_fungal_media; pH 5.5 -0.4
stress Lomefloxacin 0.012 mM -0.3
stress Cisplatin 0.003 mg/ml -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3
carbon source L-Arabinose (C) -0.3
carbon source Xylitol (C) -0.3
carbon source D-Xylose (C) -0.3
carbon source L-Proline (C) +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
carbon source a-Ketoglutaric (C) +0.4
carbon source L-Rhamnose (C) +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.6
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HSERO_RS04660