Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS04190
stress	Cobalt chloride 0.2 mM	-1.2
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-1.1
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-1.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.0
vitamin	No vitamins t2	-1.0
micoeukaryotes	Dictyostellum sp.mixed culture-2	-1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9
plant	Control soil assay; outgrowth in LB	-0.9
micoeukaryotes	C.elegans, mixed culture-2	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.9
carbon source	L-Asparagine (C)	-0.9
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
agar plate interaction control	Taped volatile agar plate with no fungus	-0.8
carbon source	L-Asparagine (C)	-0.8
carbon source	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM	-0.8
carbon source	L-Arabinose (C)	-0.8
vitamin	With vitamins t2	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-0.8
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.8
stress	Nickel (II) chloride 0.6 mM	-0.8
stress	Cisplatin 0.003 mg/ml	-0.7
carbon source	D-Mannose (C)	-0.7
carbon source	D,L-Malic Acid (C)	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.7
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	+0.9
carbon source	Carbon source 2-Deoxy-D-Ribose 5 mM	+1.0
carbon source	Carbon source 2-Deoxy-D-Ribose 5 mM	+1.3
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