Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS03575
plant	Control soil assay; outgrowth in LB	-3.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-2.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.9
stress	sodium fluoride 100 mM	-1.8
carbon source	D-Gluconic Acid (C)	-1.7
stress	nitrite 20 mM	-1.5
carbon source	D-Galactose (C)	-1.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.4
stress	Nickel (II) chloride 0.6 mM	-1.3
carbon source	a-Ketoglutaric (C)	-1.3
carbon source	D-Sorbitol (C)	-1.2
plant	Control soil assay; outgrowth in LB	-1.2
carbon source	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM	-1.1
carbon source	D-Glucose-6-Phosphate (C)	-1.0
carbon source	D-Glucose (C)	-0.9
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-0.9
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	+0.9
r2a control	R2A control	+0.9
carbon source	D-Ribose (C)	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.9
carbon source	D-Lactate (C)	+0.9
carbon source	D-Glucose (C)	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+1.0
carbon source	Glycerol (C)	+1.1
micoeukaryotes	C.elegans, mixed culture-2	+1.2
carbon source	L-Rhamnose (C)	+1.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+4.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+4.2
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