Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Group Condition HSERO_RS03060
stress Cisplatin 0.003 mg/ml -2.2
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.9
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.8
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.6
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.5
carbon source D-Lactate (C) -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4
micoeukaryotes C.elegans, mixed culture-2 -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3
stress Lomefloxacin 0.012 mM -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.2
carbon source L-mannose (C) -1.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.2
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -1.2
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.1
carbon source D-Mannitol (C) -1.1
supernatant control Vogels_fungal_media 0.1X -1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0
agar plate interaction control Taped volatile agar plate with no fungus -1.0
carbon source D-Galactose (C) -1.0
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -1.0
control NoPredeControl +1.0
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HSERO_RS03060