Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS03050
carbon source D-Xylose (C) -0.5
carbon source L-Lactate (C) -0.5
carbon source D-Glucose (C) -0.4
stress Fusidic 0.025 mg/ml -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
carbon source L-Asparagine (C) -0.3
stress Lomefloxacin 0.012 mM -0.3
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.3
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.3
carbon source L-Fucose (C) -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
stress Cobalt chloride 0.2 mM +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
control NoPredeControl +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
supernatant control Vogels_fungal_media; pH 5.5 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
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HSERO_RS03050