Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS02510
r2a control R2A control -0.5
stress Sisomicin 0.125 mg/ml -0.3
carbon source D-Ribose (C) -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.3
control NoPredeControl +0.3
stress Chloride stress +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3
carbon source D-Xylose (C) +0.3
carbon source L-Arabinose (C) +0.3
nitrogen source L-Glutamic (N); high aeration +0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3
carbon source L-mannose (C) +0.3
supernatant control Vogels_fungal_media 0.1X +0.4
stress Cobalt chloride 0.2 mM +0.4
supernatant control Vogels_fungal_media; pH 5.5 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4
carbon source pyruvate (C) +0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4
nitrogen source Ammonium chloride (N); low aeration +0.4
agar plate interaction control Taped volatile agar plate with no fungus +0.4
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
agar plate interaction control Taped volatile agar plate with no fungus +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6
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HSERO_RS02510