Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS01965
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 3 days	-2.3
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	-2.3
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-2.3
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	-2.3
nitrogen fixation	L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days	-2.2
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 8 days	-2.1
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	-1.9
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 8 days	-1.9
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 3 days	-1.7
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 3 days	-1.7
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-1.6
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-1.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.5
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.4
nitrogen fixation control	L-Malic (C) with ammonium chloride; anaerobic; 3 days	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.2
carbon source	D-Mannitol (C)	-1.2
carbon source	D,L-Lactate (C)	-1.1
stress	Cisplatin 0.003 mg/ml	-1.1
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	-1.1
carbon source	D,L-Lactate (C)	-1.0
carbon source	Carbon source Phenylacetic 5 mM	-0.9
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.9
carbon source	D-Glucose (C)	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.9
nutrient	L-Histidine	-0.9
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