Fitness for 1 genes in Herbaspirillum seropedicae SmR1

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition HSERO_RS01560
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7
carbon source D-Gluconic Acid (C) -0.5
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.3
carbon source D,L-Lactate (C) -0.3
carbon source D-Galactose (C) -0.3
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.3
carbon source L-Fucose (C) -0.3
carbon source succinate (C) -0.3
carbon source D-Glucose-6-Phosphate (C) -0.3
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3
carbon source Xylitol (C) -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.2
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3
stress Dimethyl Sulfoxide 5 vol% +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
stress Cisplatin 0.003 mg/ml +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3
nitrogen source L-Proline (N) +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4
stress Cobalt chloride 0.2 mM +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5
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HSERO_RS01560