Fitness for 1 genes in Herbaspirillum seropedicae SmR1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	HSERO_RS01335
carbon source	Xylitol (C)	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.5
carbon source	Xylitol (C)	-0.5
carbon source	D,L-Lactate (C)	-0.5
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4
carbon source	D-Ribose (C)	-0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.4
carbon source	L-Glutamine (C)	-0.4
nutrient	Min media with glucose	+0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-1	+0.4
nitrogen fixation control	D-Glucose (C) with ammonium chloride; anaerobic; 8 days	+0.4
supernatant control	Vogels_fungal_media; pH 5.5	+0.4
carbon source	D-Mannitol (C)	+0.4
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.4
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
carbon source	L-Fucose (C)	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.6
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.7
plant	Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB	+1.0
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