Fitness for 1 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS20150
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-6.5
phage	K. M5a1 KLEB10 MOI 10	-5.4
nitrogen source	Gly-DL-Asp (N)	-5.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-5.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-5.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-4.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-4.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-4.2
carbon source	acetate (C)	-4.1
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-3.9
carbon source	D,L-Malic Acid (C)	-3.8
carbon source	acetate (C)	-3.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-3.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM	-3.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-3.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-3.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-3.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-3.4
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-3.4
carbon source	L-Glutamine (C)	-3.3
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-3.3
nitrogen source	L-aspartic (N)	-3.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-3.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-3.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-3.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-2.9
mixed community	RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	-2.9
stress	Chloramphenicol 0.001 mg/ml	-2.8
stress	Sisomicin 0.008 mg/ml	+5.8
stress	Sisomicin 0.008 mg/ml	+7.4
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