Fitness for 1 genes in Klebsiella michiganensis M5al

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition BWI76_RS01000
supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.5
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -1.5
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2
nitrogen source L-tyrosine (N) -1.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.1
nitrogen source Uridine (N) -1.1
nitrogen source D-Serine (N) -1.0
carbon source L-Malic (C) -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9
r2a control R2A control -0.9
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.8
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.8
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.9
phage KLEB20 MOI 1 +0.9
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x +1.0
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x +1.0
phage KLEB1 MOI 10 +1.0
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +1.0
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +1.0
micoeukaryotes Acanthamoeba sp., muxed culture-2 +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +1.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2
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BWI76_RS01000