Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS35660
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.8
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7
carbon source	D-Galacturonic Acid (C)	-0.7
phage	36hr PHYTO8 MOI 10	-0.7
carbon source	D-Glucose (C)	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6
r2a control	R2A control	-0.6
phage	24hr PHYTO3 MOI 10	-0.5
in planta	Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
carbon source	D-Glucose (C)	-0.5
carbon source	L-Arabinose (C)	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	-0.5
temperature	LB, 37C	-0.5
pH	LB, pH6	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
carbon source	D-Xylose (C)	+0.5
nutrient	Min media with glucose	+0.5
carbon source	Protocatechuic Acid (C)	+0.5
pH	LB, pH5	+0.5
nitrogen source	L-Serine (N)	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6
nitrogen source	Carnitine Hydrochloride (N)	+0.6
nitrogen source	L-Lysine (N)	+0.7
nitrogen source	L-Citrulline (N)	+0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.0
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