Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS35230
carbon source	Phenylacetic 5 mM (C)	-3.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.7
nitrogen source	L-Lysine (N)	-2.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.7
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-1.6
phage	24hr PHYTO6 MOI 10	-1.5
carbon source	Protocatechuic Acid (C)	-1.4
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-1.3
nitrogen source	NAG (N)	-1.3
temperature	LB, 23C	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.1
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.2
phage	36hr PHYTO2 MOI 0.1	+1.3
motility	outer cut, LB soft agar motility assay	+1.3
phage	24hr PHYTO9 MOI 10	+1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.4
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.9
carbon source	2-Deoxy-D-ribonic lithium salt (C)	+2.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+2.2
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