Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition BPHYT_RS34650
phage P. phyto PHYTO2 MOI 1 -1.1
nophagecontrol 24hr Phyto Lib only -1.0
carbon source L-Arabinose (C) -1.0
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.9
supernatant control Vogels_fungal_media 0.1X -0.8
phage 36hr PHYTO7 MOI 1 -0.8
phage 36hr PHYTO8 MOI 0.1 -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8
phage 24hr PHYTO2 MOI 0.1 -0.8
motility inner cut, LB soft agar motility assay -0.8
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7
nophagecontrol 36hr Phyto Lib only -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6
carbon source L-Malic (C) -0.6
phage P. phyto corn MOI 1 -0.6
phage 24hr PHYTO10 MOI 1 +0.6
motility inner cut, LB soft agar motility assay +0.6
carbon source D,L-Lactate (C) +0.7
nitrogen source L-Lysine (N) +0.7
carbon source adipate (C) +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.9
carbon source Protocatechuic Acid (C) +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0
nitrogen source Carnitine Hydrochloride (N) +1.0
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BPHYT_RS34650