Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS33395
phage	36hr PHYTO6 MOI 10	-1.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	-0.9
phage	24hr PHYTO MOI 0.1	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
phage	36hr PHYTO1 MOI 10	-0.7
phage	24hr PHYTO10 MOI 1	-0.7
phage	36hr PHYTO7 MOI 0.1	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6
nophagecontrol	24hr Phyto Lib Only	-0.6
nophagecontrol	36hr Phyto Lib Only	-0.6
carbon source	Phenylacetic 5 mM (C)	-0.6
nitrogen source	Putrescine (N)	-0.6
phage	36hr PHYTO1 MOI 1	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
phage	36hr PHYTO8 MOI 10	-0.5
nitrogen source	Ammonium chloride (N)	-0.5
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	-0.5
motility	inner cut, LB soft agar motility assay	-0.5
phage	24hr PHYTO7 MOI 10	-0.5
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-0.5
phage	24hr PHYTO9 MOI 0.1	-0.5
phage	36hr PHYTO10 MOI 1	-0.5
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	+0.5
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.7
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.9
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