Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS33355
phage	P. phyto PHYTO2 MOI 1	-2.2
phage	36hr PHYTO7 MOI 1	-1.6
phage	36hr PHYTO8 MOI 0.1	-1.4
phage	24hr PHYTO1 MOI 10	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.2
r2a control	R2A control	-1.2
phage	36hr PHYTO10 MOI 10	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.1
phage	24hr PHYTO2 MOI 0.1	-1.1
phage	24hr PHYTO MOI 0.1	-0.9
no phage control	No phage control	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.9
nophagecontrol	24hr Phyto Lib only	-0.9
in planta	Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	-0.9
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.8
phage	36hr PHYTO2 MOI 1	-0.8
phage	24hr PHYTO1 MOI 10	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.8
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	+0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.8
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+1.0
supernatant control	Vogels_fungal_media; pH 5.5	+1.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	+1.1
supernatant control	Vogels_fungal_media 0.1X	+1.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+1.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.5
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