Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS32325
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.8
nitrogen source	L-Proline (N)	-0.7
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-0.7
phage	36hr PHYTO1 MOI 1	-0.7
phage	36hr PHYTO9 MOI 0.1	-0.6
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-0.6
phage	24hr PHYTO7 MOI 10	-0.6
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.5
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.5
nitrogen source	L-Isoleucine (N)	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	+0.5
carbon source	D-Lactate (C)	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
stress	Paraquat dichloride 0.032 mg/ml	+0.5
carbon source	D-Xylose (C)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
nitrogen source	NAG (N)	+0.5
phage	24hr PHYTO6 MOI 0.1	+0.5
phage	24hr PHYTO4 MOI 0.1	+0.5
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.6
phage	24hr PHYTO3 MOI 10	+0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6
carbon source	Sebacic (C)	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7
carbon source	adipate (C)	+0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
carbon source	Protocatechuic Acid (C)	+0.7
motility	outer cut, LB soft agar motility assay	+1.0
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