Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS31470
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.9
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	-1.2
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	-0.9
phage	24hr PHYTO7 MOI 10	-0.9
phage	36hr PHYTO10 MOI 10	-0.9
phage	24hr PHYTO11 MOI 0.1	-0.8
phage	24hr PHYTO11 MOI 1	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.7
phage	36hr PHYTO10 MOI 1	+0.8
phage	36hr PHYTO MOI 0.1	+0.8
supernatant control	Vogels_fungal_media; pH 5.5	+0.8
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	+0.8
phage	P. phyto corn MOI 0.1	+0.8
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.9
carbon source	Sebacic (C)	+0.9
carbon source	Dodecandioic (C)	+0.9
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.9
phage	36hr PHYTO6 MOI 0.1	+1.0
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.0
phage	36hr PHYTO7 MOI 1	+1.0
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.0
carbon source	adipate (C)	+1.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+1.1
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.2
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