Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS28875
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.1
phage	24hr PHYTO6 MOI 1	-1.1
phage	36hr PHYTO2 MOI 1	-1.0
nophagecontrol	36hr Phyto Lib only	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9
phage	36hr PHYTO1 MOI 10	-0.8
phage	36hr PHYTO3 MOI 1	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8
nitrogen source	D-Alanine (N)	-0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.7
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.6
carbon source	L-Arabinose (C)	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
carbon source	L-Alanine (C)	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	+0.7
motility	outer cut, LB soft agar motility assay	+0.7
phage	36hr PHYTO6 MOI 1	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.7
carbon source	Protocatechuic Acid (C)	+0.7
phage	PHYTO3 MOI 0.1	+0.7
carbon source	D-Glucose (C)	+0.8
temperature	LB, 37C	+0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	+1.0
supernatant control	Vogels_fungal_media; pH 5.5	+1.1
		remove BPHYT_RS28875