Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition BPHYT_RS27675
phage 24hr PHYTO7 MOI 10 -0.8
phage 24hr PHYTO6 MOI 10 -0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6
supernatant control Vogels_fungal_media 0.1X -0.6
phage 24hr PHYTO9 MOI 0.1 -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.6
phage 36hr PHYTO4 MOI 1 -0.5
phage 24hr PHYTO MOI 0.1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5
phage 36hr PHYTO3 MOI 1 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4
nitrogen source L-Phenylalanine (N) -0.4
carbon source Malonic (C) -0.4
carbon source Malonic (C) -0.4
phage 36hr PHYTO10 MOI 10 -0.4
carbon source Gly-Glu (C) +0.3
stress Paraquat dichloride 0.032 mg/ml +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
carbon source Phenylacetic 5 mM (C) +0.5
vitamin With vitamins t1 +0.6
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BPHYT_RS27675