Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition BPHYT_RS27110
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.6
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.6
phage 24hr PHYTO2 MOI 1 -0.5
phage P. phyto corn MOI 1 -0.5
phage PHYTO3 MOI 0.1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5
phage 36hr PHYTO11 MOI 0.1 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
motility inner cut, LB soft agar motility assay +0.5
phage 24hr PHYTO3 MOI 0.1 +0.5
nitrogen source Ammonium chloride (N) +0.5
carbon source 2-Deoxy-D-Ribose (C) +0.5
phage 24hr PHYTO4 MOI 10 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5
phage 24hr PHYTO3 MOI 1 +0.6
phage 24hr PHYTO8 MOI 1 +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
no phage control No phage control +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7
phage 24hr PHYTO9 MOI 10 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9
carbon source Malonic (C) +1.1
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BPHYT_RS27110