Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS26730
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	-1.7
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	-1.6
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	-1.4
phage	36hr PHYTO2 MOI 1	-1.3
stress	Polymyxin B sulfate 0.0625 mg/ml	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.2
phage	24hr PHYTO3 MOI 10	-1.1
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-1.0
phage	P. phyto corn MOI 0.1	-1.0
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-0.8
phage	36hr PHYTO8 MOI 0.1	-0.8
nitrogen source	L-Serine (N)	-0.7
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-0.7
phage	24hr PHYTO MOI 0.1	-0.7
phage	P. phyto corn MOI 1	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	-0.7
no phage control	No phage control	-0.6
motility	outer cut, LB soft agar motility assay	+0.6
supernatant control	Vogels_fungal_media 0.1X	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7
phage	36hr PHYTO8 MOI 10	+0.7
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
phage	36hr PHYTO9 MOI 1	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.8
carbon source	Suberic (C)	+0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.0
phage	24hr PHYTO3 MOI 10	+1.0
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