Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition BPHYT_RS22950
phage 24hr PHYTO1 MOI 10 -1.0
phage 36hr PHYTO1 MOI 1 -0.8
phage 36hr PHYTO1 MOI 1 -0.7
vitamin With vitamins t1 -0.6
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.6
phage 24hr PHYTO3 MOI 0.1 -0.6
vitamin With vitamins t2 -0.6
phage 24hr PHYTO3 MOI 10 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
phage 36hr PHYTO6 MOI 10 -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5
phage 24hr PHYTO10 MOI 10 -0.5
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -0.5
phage 24hr PHYTO8 MOI 1 -0.5
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
phage 36hr PHYTO7 MOI 0.1 -0.5
phage 36hr PHYTO1 MOI 10 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
carbon source D,L-Lactate (C) +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5
phage P. phyto corn MOI 0.1 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.5
carbon source adipate (C) +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7
carbon source Sebacic (C) +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.8
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BPHYT_RS22950