Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Group Condition BPHYT_RS22600
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8
phage 24hr PHYTO6 MOI 10 -0.8
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.7
nitrogen source D-Alanine (N) -0.6
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6
carbon source Azelaic (C) -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6
phage 36hr PHYTO11 MOI 1 +0.6
phage 36hr PHYTO11 MOI 0.1 +0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.6
motility outer cut, LB soft agar motility assay +0.6
phage 36hr PHYTO2 MOI 1 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6
phage 24hr PHYTO3 MOI 10 +0.6
phage 36hr PHYTO4 MOI 1 +0.6
phage 36hr PHYTO7 MOI 1 +0.7
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
stress Paraquat dichloride 0.064 mg/ml +0.7
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +1.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.2
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4
carbon source 2-Deoxy-D-Ribose (C) +2.1
carbon source 2-Deoxy-D-Ribose (C) +2.2
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BPHYT_RS22600