Fitness for 1 genes in Burkholderia phytofirmans PsJN

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Group Condition BPHYT_RS22440
nutrient Min media with glucose -0.4
nitrogen source L-Phenylalanine (N) -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.3
lb LB +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
carbon source Malonic (C) +0.4
carbon source 2-Deoxy-D-Ribose (C) +0.4
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.4
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
motility outer cut, LB soft agar motility assay +0.4
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
phage 36hr PHYTO3 MOI 1 +0.4
carbon source L-Fucose (C) +0.5
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5
phage 24hr PHYTO MOI 0.1 +0.5
supernatant control Vogels_fungal_media; pH 5.5 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.7
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.8
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BPHYT_RS22440