Fitness for 1 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS20580
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	-0.8
temperature	LB, 37C	-0.8
carbon source	D-Glucose (C)	-0.6
carbon source	Phenylacetic 5 mM (C)	-0.6
tn7 efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50	-0.5
phage	24hr PHYTO7 MOI 1	-0.5
r2a control	R2A control	+0.5
carbon source	propionate (C)	+0.5
carbon source	Azelaic (C)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
lb_dap plate control	LB_DAP agar plate, outgrowth in LB	+0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	+0.5
carbon source	D-Glucose (C)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days	+0.6
carbon source	L-Fucose (C)	+0.6
r2a control	R2A control	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.6
phage	P. phyto PHYTO2 MOI 1	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+0.6
phage	24hr PHYTO9 MOI 0.1	+0.6
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	+0.6
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.7
carbon source	Sebacic (C)	+0.7
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	+0.7
carbon source	succinate (C)	+0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	+0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+1.1
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